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Fix to d.f. from fitMk.parallel and fitMk(...,opt.method="optimParallel")

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Plotting a tree based on the coordinates computed internally by phytools or...

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Phylomorphospace projection with a fixed aspect ratio

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Computing and graphing the probabilities of "changes" (different starting &...

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Creating a phylomorphospace projection (using phytools) that pretty much...

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LTT for a "multiSimmap" object on multiple scales

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Re-coloring a contMap plot using the "viridis" color palette

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Adjustable color palette for the Mk model plotting function, plot.Qmatrix

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Computing & visualizing the distribution of character transitions from a set...

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Post-hoc tests for a generalized phylogenetic ANOVA or ANCOVA

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Fitting and comparing alternate flavors of Pagel's (1994) correlated binary...

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Ancestral state reconstruction under the polymorphic trait evolution using...

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Generating a ggplot phylomorphospace plot with phytools

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Fix to bug in phytools force.ultrametric function to coerce a tree to be...

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On a strange algorithm for plotting trees in R

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Scheduling a Spring 2023 R phylogenetics workshop

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plotTree.wBars in "radial" style

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Smooth spline phylogram method now in phytools

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Model-comparison, ancestral state reconstruction, and stochastic mapping with...

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New generic stochastic mapping method for multiple fitted Mk discrete...

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