Quantcast
Channel: Phylogenetic Tools for Comparative Biology
Browsing all 808 articles
Browse latest View live

Image may be NSFW.
Clik here to view.

Update to phylo.to.map to permit use with ape's nodelabels, tiplabels, etc.

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

describe.simmap when summarizing the results from stochastic map trees with...

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

New function to simulate species trees from genus-level tree

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

Updates to permit user control of line end types in plotSimmap

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Some updates to phytools

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

New phytools version (>=0.5-62) on its way to CRAN

body, td { font-family: sans-serif; font-size: 13px; } body { max-width: 800px; margin: auto; padding: 1em; line-height: 20px; } tt, code, pre { font-family: 'DejaVu Sans Mono', 'Droid Sans Mono',...

View Article

Updated phytools is now on CRAN

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

Custom color palettes in plotBranchbyTrait

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

Coloring tip nodes in phylomorphospace3d

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

Wrap-up & t-shirt design for Bariloche (Argentina) Macroevolution course

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

Using phytools to plot different genera with different colors

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

S3 as.multiPhylo method for objects of class "phylo"

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

Methods & object class for phyl.RMA (phylogenetic RMA regression)

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

Extracting reconstructed trait values along edges at different time-slices of...

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

Plotting terminal edges of the tree different colors depending (or not) on a...

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

Overlaying a contMap style continuous character map on a dotTree plot

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

plotTree.barplot with more user options, including stacked bars for multiple...

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article


Image may be NSFW.
Clik here to view.

Creating a phylogenetic tree in R using phytools::bind.tip in interactive mode

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

Bug fix for write.simmap for "multiSimmap" object class

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article

Image may be NSFW.
Clik here to view.

New tree drawing method to extract phylogeny from a plotted figure

pre .operator, pre .paren { color: rgb(104, 118, 135) } pre .literal { color: #990073 } pre .number { color: #099; } pre .comment { color: #998; font-style: italic } pre .keyword { color: #900;...

View Article
Browsing all 808 articles
Browse latest View live


Latest Images