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Customizing a bar plot paired with a plotted phylogeny

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When a phylogeny fails is.binary but is not fixed with multi2di

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Preserving node & edge labels after optimizing node rotation in cophylo

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New phytools version (0.6-60) on CRAN

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Plotting a "simmap" or "contMap" object in unrooted style

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Computing phylogenetic PCA scores for individual data, when PCs were...

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dotTree with trait column labels

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Testing for differences in the rate (or process) of discrete character...

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Plotting confidence intervals on internal nodes in a traitgram

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A phylogenetic Christmas tree in R (adapted from Gustavo Ballen)

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MCCR test for Pybus & Harvey's γ on incompletely sampled trees using phytools

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MCCR test now in phytools

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Unweighted & weighted square-change-parsimony vs. ML ancestral state estimation

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Mk model for intraspecifically polymorphic discrete characters

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Plotting method for Mk model with intraspecific polymorphism

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Phylogenetic imputation with multivariate data

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Projecting a phylogenetic tree onto a map with multiple geographic points per...

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A follow-up comment on phylo.to.map for making & plotting rightward-facing trees

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Update to "phylo.to.map" plot method to prevent the object from being...

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Projecting a phylogeny onto a geographic map showing species ranges in R

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